CDS
| Accession Number | TCMCG023C13572 |
| gbkey | CDS |
| Protein Id | PIN13666.1 |
| Location | join(84930..85251,85590..85785,85867..86005,86244..86318,86614..86767,87369..87579,87672..87759,87878..88021,88696..88767,88881..88952,89383..89489,89654..89802,90052..90277,90475..90700,91097..91242,91473..91635,92007..92151,92509..92672,92770..93015) |
| Organism | Handroanthus impetiginosus |
| locus_tag | CDL12_13717 |
Protein
| Length | 1014aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA324125, BioSample:SAMN05195323 |
| db_source | NKXS01002429.1 |
| Definition | RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus] |
| Locus_tag | CDL12_13717 |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGAGGCTTCTCCCCGGAAGGAAGCTCAATGTCCTCTACCACAATCTGTTGAAAAAATCATAGTAGATATTTGTAATGACCAGTCACAGCCACTCCTCCCTAACGCTGTCCGCCGACTGCTCGCTGAAATTGGCGAGAAAGCTGCCTTGGAACTTCTTTTAAGAATTAAGGGCCAGAATATTACAAAATCATTTTCGGGTTATGTTATAACACTGCTGAAGAAGTATCATCCATCCCTTTTTCCCAGCCCTTCTAATTCTCCCAATAAAAGGCCGTTGTCACCCTCGTGTAGTTCGCCTAACAGTAGTCCTCTGAAAAAGAGCCCTCCACAAATCAGTCGGATGCAATCACTTAGAGATGAAGCTCTAGACTGGAAAGGCCCTAATGTTGCACCTGAGTCATCATCTACTGGTGAACTCAAAGAGATGACAAACCGTGCAACAATCAGTGAGCAGTTAAAAATTCTAAGCAAACTTGAGTACAGAAAACTATTTTTGGTCCTAAGCTACATTGGGAGGCAAAAGTTGGAAGATGTGATGACCATAGATGGTACTAATGATATTGTAAACAAGAAGGATCTGCAAATGACAACGTTTGAGGCAGAAATTTGGAAAACCTATGGAAACAAGTATTGTGACCGGTCGGATCGTCGGCAGTATTTGAATTGGGATTCTGGGAAAACCTATTTCTACTACTGTTATGTTCACCAAGATGGAAGTTATCATTTCGAGGGCCCATCTCTGAACAACACTCGAAATCATTTACAACGGGTGTTAGGAGATGAAAATGTGCTGATAGTAAAGTTCCTAGGGGACGATATACATGGCTTCTACACTATTGAGCGGGAAGGGATCCTTGTTGGTCCTAGGCGCTTCCAATTTCTGGTGTTCAAAGATGAACAAAATCGACACAAGAAAAACCAAACAGAGGAGAAGAAGGCAACTTCTGCTGTGAAGGCCCATTTTGTCCGCATTGGCTATGTTGAGCCCAAGTTCGAAGATAAAACTTATATTCTATCTGGCAAAAGTATTGGTGAAGCAAGGCGCCTTTTTATGCATGTACACAAAGTCTTGACTATGGAAAAATACATGGCCAGATTTTCCCTGGTCCTGTCAACGACAATAAAGCTTCAAATCAATTTTGGTGATGTTAAAGTTGAAACGATAGAAGATATACCTTTCAGAGATGATTCGGGTTCTCTTGTCCGTGATGAAGACGGGGATCTTCTTATACATACGGATGGAACAGGATTTATCTCAGAAGACTTGGCAATGAATTGTCCAGAAGATTTTTCTGTAGCAAAGTACATCACAGACAATAGTTTTGAGACGTATCACGTTACTGACTCCAAGGACATATCCTGTCAGACAAGACCACCAAAACCCAGGAGTAAAGAACCGCCTCTACTGATGCAATGCCGTTTGTTTTACAACGGTATGGCTGTTAAGGGAACGCTTCTTCTCAATAAAAAGCTTAAACCAGGAGTAATTCAGGTTAGGCCTTCCATGATTAAAGTTCGGGGGGGCTCAGAGTTGCCAGTGGAAGAAAAATTTAACTCGCTGGAGATTGTGGATGTTAGTCATAGACCGCACAGAACTTATCTATCAAAAATGTTGATTTGTCTTTTGACCTATGGTGAGGTTCCTCCACAATTCTTTCTAAATTTGCTGACAAATGCTTTGGAAGACACTCAGAAAGTTTGCTCCGACAAGCGTTCAGCTCTGAAAGTCGCATCCAACCAAGACGGGTTAGATTATGGTTTTGCGGCCCAAATAATGATTTCATGTGGGATACCATTGAACGAACCATATCTCCAGCACTGTCTCCGGAATTTAAGGAAAGATGGAAAATCCAAACTTAAAAAAGGGAAAATACCTATCAGTGAAAGCTTCTACCTGATGGGGACAGCTGACCCGACTGGTGTATTAGACAATGGTCAAGTTTGTGTCATCCTTGACAACGGTCAACTTTCGGGTAAGGTATTGGTGTACCGAAACCCTGGATTGCACTTTGGCGATATTCATGTCATGGAGGCTGTGTATGTAAAGGAATTGGAAGAGTATGTTGGCAATTCCAAGTATGGCATATTCTTTTCCACCAAAGGCTCGAAATCAGCCGCTTACGAAATGGCAACCGGGGATTTTGATGGAGACATGTACTGGATTTCAAGACATCCTGAGTTGTTGAGACACTTTAAAACAAGTGAACCTTGGCGTCGTTCCTGCTCAACAACTATGCCTTCGAATAGCAGAAAGCCACAAGAATTATCGTCTGAGGAGCTGGAACACGAACTTTTTCGACGATATATTGAGGCTAGGAGACCAAGCTTCGACATGCCATCAGCTGCAAATAGCTGGCTCGCATTTATGGATCGACTGTTGACACTAGGGGATCATCGCGCCTCTGAAAAGAATTGTTTAAGGAAAAAGATCATTCAATTGATCGACATCTACTATGATGCAATAGATGCACCTAAAAGTGGGAAAAGGGTCCATTTTCCAAACAACTTGAAAGCTGAGATGTATCCACATCACATGGAAAGGGGGCCTGAGTACAGCTACCACTCATCCTCTATTTTGGGTCAAATTTATGATATAATAGAGGGTTATAAAGATGAGGCTGTGCCTAAGACAGAAATCTGGAAGTTACCATGTTTTGATCTTCCAACTCCAGAAATATACATCGACAAGTGGAAAACCAAGTATGAAGATTACCGCAAGGAAATGACTGCAGCCTTGAACTCTGGCCATGAATCAAAGAACGACGCTGCCAATGATGTCATCAAGAAGTACAAACAGTTGCTGTATGATGCTCCTGAGATGGAAGAAAGTACGAAGGACACCACGGTGATCTATGAGGAGGCCCTTGCTATATATCACGTAACTTACGACTATGCAAAAAGTGCCAATGATTGTAGCAAATGCAATTTTGCATGGAAAGTGGCAGGATCTGCACTGTGTAATCTGTGTGCCTGGAAAACAGCTGGGCCGAAGGAGAAGCCATTGATGATTGTGCCGTCTGTTCTTCGTGATGTGTTGAATTAG |
| Protein: MEASPRKEAQCPLPQSVEKIIVDICNDQSQPLLPNAVRRLLAEIGEKAALELLLRIKGQNITKSFSGYVITLLKKYHPSLFPSPSNSPNKRPLSPSCSSPNSSPLKKSPPQISRMQSLRDEALDWKGPNVAPESSSTGELKEMTNRATISEQLKILSKLEYRKLFLVLSYIGRQKLEDVMTIDGTNDIVNKKDLQMTTFEAEIWKTYGNKYCDRSDRRQYLNWDSGKTYFYYCYVHQDGSYHFEGPSLNNTRNHLQRVLGDENVLIVKFLGDDIHGFYTIEREGILVGPRRFQFLVFKDEQNRHKKNQTEEKKATSAVKAHFVRIGYVEPKFEDKTYILSGKSIGEARRLFMHVHKVLTMEKYMARFSLVLSTTIKLQINFGDVKVETIEDIPFRDDSGSLVRDEDGDLLIHTDGTGFISEDLAMNCPEDFSVAKYITDNSFETYHVTDSKDISCQTRPPKPRSKEPPLLMQCRLFYNGMAVKGTLLLNKKLKPGVIQVRPSMIKVRGGSELPVEEKFNSLEIVDVSHRPHRTYLSKMLICLLTYGEVPPQFFLNLLTNALEDTQKVCSDKRSALKVASNQDGLDYGFAAQIMISCGIPLNEPYLQHCLRNLRKDGKSKLKKGKIPISESFYLMGTADPTGVLDNGQVCVILDNGQLSGKVLVYRNPGLHFGDIHVMEAVYVKELEEYVGNSKYGIFFSTKGSKSAAYEMATGDFDGDMYWISRHPELLRHFKTSEPWRRSCSTTMPSNSRKPQELSSEELEHELFRRYIEARRPSFDMPSAANSWLAFMDRLLTLGDHRASEKNCLRKKIIQLIDIYYDAIDAPKSGKRVHFPNNLKAEMYPHHMERGPEYSYHSSSILGQIYDIIEGYKDEAVPKTEIWKLPCFDLPTPEIYIDKWKTKYEDYRKEMTAALNSGHESKNDAANDVIKKYKQLLYDAPEMEESTKDTTVIYEEALAIYHVTYDYAKSANDCSKCNFAWKVAGSALCNLCAWKTAGPKEKPLMIVPSVLRDVLN |